Burkholderia cenocepacia AU 1054, BCEN_RS14085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006278 RNA-dependent DNA biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00866
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003723 RNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00866
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003964 RNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00866
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA 174 192 1.1E-8
Pfam PF08388 Group II intron, maturase-specific domain IPR013597 Group II intron, maturase-specific 336 403 6.5E-16
ProSiteProfiles PS50878 Reverse transcriptase (RT) catalytic domain profile. IPR000477 Reverse transcriptase domain 92 317 22.118
SUPERFAMILY SSF56672 60 392 1.33E-52
CDD cd01651 RT_G2_intron 107 317 3.27877E-88
PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA 106 119 1.1E-8
TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase IPR030931 Group II intron reverse transcriptase/maturase 55 399 2.6E-120
PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA 232 245 1.1E-8
Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IPR000477 Reverse transcriptase domain 111 316 2.2E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.