Strain |
Burkholderia ambifaria AMMD - Assembly GCF_000203915.1
GCF_000203915.1|latest |
Locus Tag |
BAMB_RS28750
|
NCBI Old Locus Tag | Bamb_5768 |
Name |
hmqF
|
Replicon | chromosome 3 |
Genomic location | 232857 - 236675 (+ strand) |
Comment | Belongs to the HMAQ biosynthesis operon hmqABCDEFG |
RefSeq | WP_041491757.1 |
GI | 753123286 |
NCBI Locus Tag | BAMB_RS28750 |
NCBI Old Locus Tag | Bamb_5768 |
RefSeq | WP_041491757.1 |
Feature Type | CDS |
Coding Frame | NA |
Product Name |
AMP-dependent synthetase
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -16.95 |
Kyte-Doolittle Hydrophobicity Value | -0.045 |
Molecular Weight (kDa) | 137744.2 |
Isoelectric Point (pI) | 6.05 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Results | Analysis not done |
Burkholderia Ortholog Group |
BG017410 (460 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BAMB_RS28750
Search term: hmqF
Search term: AMP-dependent synthetase
|
Ensembl
97, assembly
GRCh38.p12
|
disco interacting protein 2 homolog A [Source:HGNC Symbol;Acc:HGNC:17217]
E-value:
1.4e-38
Percent Identity:
28.0
|
Ensembl
97, assembly
GRCh38.p12
|
disco interacting protein 2 homolog A [Source:HGNC Symbol;Acc:HGNC:17217]
E-value:
1.4e-38
Percent Identity:
28.0
|
Burkholderia pseudomallei, B. thailandensis, and B. ambifaria produce 4-hydroxy-2-alkylquinoline analogues with a methyl group at the 3 position that is required for quorum-sensing regulation.
Vial L, Lépine F, Milot S, Groleau MC, Dekimpe V, Woods DE, Déziel E
J Bacteriol 2008 Aug;190(15):5339-52
PubMed ID: 18539738
|
Interplay between 4-Hydroxy-3-Methyl-2-Alkylquinoline and <i>N</i>-Acyl-Homoserine Lactone Signaling in a <i>Burkholderia cepacia</i> Complex Clinical Strain.
Chapalain A, Groleau MC, Le Guillouzer S, Miomandre A, Vial L, Milot S, Déziel E
Front Microbiol 2017;8:1021
PubMed ID: 28676791
|