Burkholderia ambifaria AMMD, BAMB_RS28750 (hmqF)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0050660	flavin adenine dinucleotide binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02771	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0008610	lipid biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:cd05931	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00501	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0031177	phosphopantetheine binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00823	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00441	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055114	oxidation-reduction process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00441	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.40.50.12780		IPR042099	AMP-dependent synthetase-like superfamily	2	465	1.4E-147
Pfam	PF00441	Acyl-CoA dehydrogenase, C-terminal domain	IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal	838	987	1.7E-27
Gene3D	G3DSA:2.40.110.10				732	837	8.2E-78
Gene3D	G3DSA:1.10.540.10		IPR037069	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	618	731	8.2E-78
CDD	cd00567	ACAD			704	984	2.04012E-57
Gene3D	G3DSA:3.30.300.30				466	591	5.1E-35
Gene3D	G3DSA:1.10.1200.10		IPR036736	ACP-like superfamily	1162	1244	2.3E-17
ProSitePatterns	PS00455	Putative AMP-binding domain signature.	IPR020845	AMP-binding, conserved site	170	181	-
ProSiteProfiles	PS50075	Carrier protein (CP) domain profile.	IPR009081	Phosphopantetheine binding ACP domain	1168	1245	13.053
SMART	SM00823	Phosphopantetheine attachment site	IPR020806	Polyketide synthase, phosphopantetheine-binding domain	1174	1245	2.6E-12
SMART	SM01294				1175	1241	2.1E-6
MobiDBLite	mobidb-lite	consensus disorder prediction			591	620	-
SUPERFAMILY	SSF56645		IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	619	848	2.75E-45
Pfam	PF02770	Acyl-CoA dehydrogenase, middle domain	IPR006091	Acyl-CoA oxidase/dehydrogenase, central domain	733	824	1.0E-17
SUPERFAMILY	SSF56801				7	575	4.71E-103
Coils	Coil				1272	1272	-
Pfam	PF00550	Phosphopantetheine attachment site	IPR009081	Phosphopantetheine binding ACP domain	1176	1241	1.5E-10
Coils	Coil				894	914	-
SUPERFAMILY	SSF47336		IPR036736	ACP-like superfamily	1167	1256	1.23E-15
Pfam	PF00501	AMP-binding enzyme	IPR000873	AMP-dependent synthetase/ligase	15	471	1.3E-80
Pfam	PF02771	Acyl-CoA dehydrogenase, N-terminal domain	IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal	623	728	1.1E-12
Gene3D	G3DSA:1.20.140.10				838	980	8.2E-78
CDD	cd05931	FAAL	IPR040097	Fatty acyl-AMP ligase	17	574	0.0
SUPERFAMILY	SSF47203		IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	838	989	2.9E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.