Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00989
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00989
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SMART | SM00052 | IPR001633 | EAL domain | 407 | 652 | 1.5E-116 | |
SMART | SM00267 | IPR000160 | GGDEF domain | 225 | 397 | 3.7E-55 | |
TIGRFAM | TIGR00254 | GGDEF: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 233 | 396 | 5.5E-35 |
SUPERFAMILY | SSF141868 | IPR035919 | EAL domain superfamily | 414 | 660 | 3.4E-91 | |
TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | IPR000014 | PAS domain | 114 | 232 | 2.4E-7 |
Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 236 | 392 | 2.6E-43 |
CDD | cd01948 | EAL | IPR001633 | EAL domain | 413 | 652 | 2.34511E-108 |
Gene3D | G3DSA:3.30.450.20 | 99 | 230 | 2.3E-11 | |||
Gene3D | G3DSA:3.30.70.270 | 231 | 409 | 5.2E-55 | |||
ProSiteProfiles | PS50112 | PAS repeat profile. | IPR000014 | PAS domain | 108 | 163 | 10.715 |
Gene3D | G3DSA:3.20.20.450 | IPR035919 | EAL domain superfamily | 410 | 665 | 6.6E-101 | |
SUPERFAMILY | SSF55073 | IPR029787 | Nucleotide cyclase | 241 | 398 | 2.49E-44 | |
SUPERFAMILY | SSF55785 | IPR035965 | PAS domain superfamily | 123 | 233 | 8.86E-12 | |
ProSiteProfiles | PS50883 | EAL domain profile. | IPR001633 | EAL domain | 408 | 661 | 80.317 |
Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 414 | 647 | 2.0E-75 |
Pfam | PF00989 | PAS fold | IPR013767 | PAS fold | 114 | 212 | 6.0E-5 |
CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 237 | 395 | 6.53832E-55 |
ProSiteProfiles | PS50887 | GGDEF domain profile. | IPR000160 | GGDEF domain | 267 | 399 | 32.638 |