Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS19245 (virB6)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia K56-2Valvano
GCF_000333155.2|latest
Locus Tag
BURCENK562V_RS19245
NCBI Old Locus TagBURCENK562V_C5439
Name
virB6
Replicon ctg7180000002940B
Genomic location 3015402 - 3016553 (+ strand)
CommentThis gene is part of the B. cenocepacia K56-2 VirB-VirD-like type IV secretion system cluster.

Cross-References

RefSeq WP_006493306.1
GI 493539419
GI 493539419
NCBI Locus Tag BURCENK562V_RS19245
NCBI Old Locus Tag BURCENK562V_C5439
RefSeq WP_006493306.1

Product

Feature Type CDS
Coding Frame 1
Product Name
conjugal transfer protein TraH
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 0.07
Kyte-Doolittle Hydrophobicity Value 0.625
Molecular Weight (kDa) 39233.9
Isoelectric Point (pI) 7.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG006327 (74 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: virB6

Human Homologs

References

Involvement of a plasmid-encoded type IV secretion system in the plant tissue watersoaking phenotype of Burkholderia cenocepacia.
Engledow AS, Medrano EG, Mahenthiralingam E, LiPuma JJ, Gonzalez CF
J Bacteriol 2004 Sep;186(18):6015-24
PubMed ID: 15342570
Two type IV secretion systems with different functions in Burkholderia cenocepacia K56-2.
Zhang R, LiPuma JJ, Gonzalez CF
Microbiology 2009 Dec;155(Pt 12):4005-4013
PubMed ID: 19744991