Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS18925 (opcI)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0015288 | porin activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:cd00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56935 | 29 | 344 | 3.66E-62 | |||
| Gene3D | G3DSA:2.40.160.10 | IPR023614 | Porin domain superfamily | 21 | 344 | 2.5E-66 | |
| CDD | cd00342 | gram_neg_porins | IPR033900 | Porin domain, Gram-negative type | 29 | 344 | 5.75839E-58 |
| Pfam | PF13609 | Gram-negative porin | IPR033900 | Porin domain, Gram-negative type | 21 | 326 | 2.9E-43 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.