Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS18810 (cciR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009372 quorum sensing
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
16041013 Reviewed by curator
Biological Process GO:2000147 positive regulation of cell motility
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
16041013 Reviewed by curator
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46894
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00038
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46894 IPR016032 Signal transduction response regulator, C-terminal effector 161 231 9.86E-18
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 171 225 1.4E-16
SMART SM00421 IPR000792 Transcription regulator LuxR, C-terminal 168 225 2.7E-19
Gene3D G3DSA:1.10.10.10 IPR036388 Winged helix-like DNA-binding domain superfamily 166 232 2.2E-23
ProSiteProfiles PS50043 LuxR-type HTH domain profile. IPR000792 Transcription regulator LuxR, C-terminal 164 229 24.966
Gene3D G3DSA:3.30.450.80 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily 6 165 2.2E-35
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 171 185 2.2E-6
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 185 201 2.2E-6
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 171 226 2.80961E-16
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 201 213 2.2E-6
SUPERFAMILY SSF75516 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily 4 162 2.09E-31
Pfam PF03472 Autoinducer binding domain IPR005143 Transcription factor LuxR-like, autoinducer-binding domain 13 155 4.0E-25

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.