Burkholderia pseudomallei 1026b, BP1026B_II0540 (hmqF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02771
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0031177 phosphopantetheine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00823
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00501
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56645
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56645
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008610 lipid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0031177 phosphopantetheine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00823
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56645
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF56645
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008610 lipid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00501
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02771
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47203 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal 844 997 3.06E-33
CDD cd05931 FAAL IPR040097 Fatty acyl-AMP ligase 17 574 0.0
Pfam PF00550 Phosphopantetheine attachment site IPR009081 Phosphopantetheine binding ACP domain 1201 1252 4.4E-9
Gene3D G3DSA:1.10.540.10 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily 629 738 2.1E-83
Gene3D G3DSA:1.10.1200.10 IPR036736 ACP-like superfamily 1171 1258 7.7E-16
SUPERFAMILY SSF47336 IPR036736 ACP-like superfamily 1179 1264 1.16E-13
Coils Coil 901 921 -
Gene3D G3DSA:3.40.50.12780 IPR042099 AMP-dependent synthetase-like superfamily 2 465 1.2E-145
Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal 630 735 1.5E-14
ProSitePatterns PS00455 Putative AMP-binding domain signature. IPR020845 AMP-binding, conserved site 170 181 -
ProSiteProfiles PS50075 Carrier protein (CP) domain profile. IPR009081 Phosphopantetheine binding ACP domain 1178 1256 12.665
MobiDBLite mobidb-lite consensus disorder prediction 600 614 -
Gene3D G3DSA:3.30.300.30 466 595 7.5E-40
SMART SM01294 1186 1252 3.1E-6
Pfam PF02770 Acyl-CoA dehydrogenase, middle domain IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain 740 831 3.0E-17
Pfam PF00501 AMP-binding enzyme IPR000873 AMP-dependent synthetase/ligase 16 471 7.1E-84
Coils Coil 1277 1277 -
Gene3D G3DSA:1.20.140.10 845 986 2.1E-83
Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal 845 994 1.1E-31
SMART SM00823 Phosphopantetheine attachment site IPR020806 Polyketide synthase, phosphopantetheine-binding domain 1185 1256 7.4E-12
SUPERFAMILY SSF56645 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily 628 855 1.31E-45
MobiDBLite mobidb-lite consensus disorder prediction 1149 1178 -
MobiDBLite mobidb-lite consensus disorder prediction 599 624 -
ProSitePatterns PS00012 Phosphopantetheine attachment site. IPR006162 Phosphopantetheine attachment site 1211 1226 -
Gene3D G3DSA:2.40.110.10 739 844 2.1E-83
SUPERFAMILY SSF56801 7 575 3.27E-107
CDD cd00567 ACAD 711 991 2.59276E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.